337 ls 338 cd misc_code 339 ls 340 pwd 341 cd 342 cd / 343 ls 344 cd bin 345 ls 346 cd 347 cd /home/emily/ 348 cd . 349 cd .. 350 pwd 351 cd .. 352 pwd 353 cd 354 ls 355 cd Desktop/ 356 cd data 357 ls 358 cd . 359 cd ~/repos/ 360 ls 361 cd shell-novice/ 362 cd data 363 ls 364 cd Users/ 365 ls 366 cd nelle 367 ls 368 clear 369 pwd 370 ls 371 ls 372 ls -F 373 ls --help 374 clear 375 ls h 376 ls -h 377 man ls 378 pwd 379 emacs example.txt 380 cat example.txt 381 emacs example2.txt 382 nano example2.txt 383 cat example2.txt 384 rm example2.txt 385 cat example.txt 386 mkdir example_dir 387 ls 388 clear 389 cd example_dir/ 390 ls 391 pwd 392 cd .. 393 rm example_dir/ 394 rm -r example_dir/ 395 ls 396 ls 397 mkdir text_files 398 ls 399 clear 400 ls 401 mv notes.txt text_files/ 402 cd text_files/ 403 ls 404 mv notes.txt .. 405 ls 406 cd .. 407 ls 408 cp notes.txt text_files/ 409 cd text_files/ 410 ls 411 cat notes.txt 412 cd .. 413 cat notes.txt 414 cp notes.txt notes_backup.txt 415 ls 416 mv notes_backup.txt notes_better_name.txt 417 ls 418 cat notes_better_name.txt 419 ls 420 ls *.txt 421 mv *.txt text_files/ 422 ls 423 cd text_files/ 424 ls 425 history 426 history > history.txt 427 less history.txt 428 cd .. && cd text_files 429 cd .. && cd creatures 430 pwd 431 cd .. && ls 432 cd molecules/ 433 ls 434 cat cubane.pdb 435 wc *.pdb 436 wc -l *.pdb 437 wc -l *.pdb> lengths.dat 438 cat lengths.dat 439 sort lengths.dat 440 sort -n lengths.dat 441 sort -n lengths.dat > sorted-lengths.dat 442 cat sorted-lengths.dat 443 wc -l *.pdb | sort -n 444 wc -l *.pdb | sort -n | head -1 445 wc -l *.pdb | sort -n | tail -1 446 wc -l *.pdb | sort -n | tail -2 447 touch "space file" 448 ls 449 ls "space file" 450 cat "space file" 451 cat space\ file 452 cat space\ file 453 cd .. 454 ls 455 cd north-pacific-gyre/ 456 ls 457 cd 2012-07-03/ 458 ls 459 wc -l *.txt | sort -n | head -5 460 wc -l *.txt | sort -n | tail -5 461 echo "hello" 462 echo "hello" > test.txt 463 cat test.txt 464 echo "hello" > test.txt 465 cat test.txt 466 echo "hello" >> test2.txt 467 cat test2.txt 468 echo "hello" >> test2.txt 469 cat test2.txt 470 cd .. 471 cd ../.. 472 cd nelle/ 473 ls 474 mv text_files/animals.txt . 475 ls 476 cat animals.txt 477 cat animals.txt 478 sort animals.txt | uniq > final.txt 479 cat final.txt 480 sort animals.txt | uniq > final.txt 481 cat final.txt 482 cd creatures/ 483 ls 484 for filename in basilisk.dat unicorn.dat ; do head -3 $filename; done 485 for filenmae in *.dat; do echo $filename; done 486 ls 487 for filenmae in *.dat; do echo $filename; done 488 ls *.dat 489 for filename in basilisk.dat unicorn.dat ; do head -3 $filename; done 490 for filename in basilisk.dat unicorn.dat ; do echo $filename; done 491 for filename in basilisk.dat unicorn.dat; do echo "Hello!"; done 492 expr 3 + 4 493 cd ../molecules/ 494 ls 495 cat cubane.pdb 496 myvar = 5 497 $myvar = 5 498 $myvar=5 499 myvar=5 500 echo $myvar 501 echo $myvar 502 clear 503 cd ~/repos/shell-novice/data/Users/nelle/ 504 cd molecules/ 505 for filename in *.pdb; do head -1 $filename >> final.txt; done 506 cat final.txt 507 nano middle.sh 508 nano middle.sh 509 bash middle.sh 510 cat octane.pdb 511 nano middle.sh 512 nano middle.sh 513 bash middle.sh cubane.pdb 514 nano middle.sh 515 bash middle.sh pentane.pdb -20 -5 516 bash middle.sh pentane.pdb -20 -2 517 nano middle.sh 518 nano middle.sh 519 middle.sh pentane.pdb -20 -2 520 ./middle.sh pentane.pdb -20 -2 521 nano middle.sh 522 nano middle.sh 523 ./middle.sh pentane.pdb 20 2 524 bash middle.sh pentane.pdb 20 2 525 echo *.* 526 nano examplescript.sh 527 bash examplescript.sh cubane.pdb 528 bash examplescript.sh cubane.pdb ethane.pdb 529 bash examplescript.sh cubane.pdb ethane.pdb octane.pdb 530 nano add_ICSPR.sh 531 bash add_ICSPR.sh *.pdb 532 ls 533 nano add_ICSPR.sh 534 history > history.txt